https://blog.sparktour.me/en/tags/bonito/ Recent content in Bonito on Sparktour’s Blog https://assets.sparktour.me/img/blog/misc/about-bg.jpg https://assets.sparktour.me/img/blog/misc/about-bg.jpg Hugo en Sun, 26 Jan 2025 21:53:35 +0800 https://blog.sparktour.me/en/posts/2025/01/25/port-ont-bonito-koi-to-jetson-arm64/ Sat, 25 Jan 2025 21:00:00 +0000 https://blog.sparktour.me/en/posts/2025/01/25/port-ont-bonito-koi-to-jetson-arm64/ Jetson is an embedded AI computing platform launched by Nvidia. Compared to laptops and servers, Jetson has a smaller size and lower power consumption, making it suitable for deployment on edge devices. Oxford Nanopore Technology has also released MinION Mk1C based on the Jetson platform for real-time analysis of sequencing data. This article describes how to install and run Bonito Basecaller on Jetson for real-time sequencing data analysis and model training on edge devices. https://blog.sparktour.me/en/posts/2024/09/25/a-look-at-nanopore-basecaller-bonito/ Wed, 25 Sep 2024 21:00:00 +0000 https://blog.sparktour.me/en/posts/2024/09/25/a-look-at-nanopore-basecaller-bonito/ Bonito, named after the bonito fish, is a basecaller developed by Oxford Nanopore Technology. In this article, I will try to explain, in an easy-to-understand way, the data flow and data formats of Bonito, as well as some knowledge needed for the secondary development of Bonito (or even other nanopore sequencing basecallers).